gitignore/R.gitignore

# History files
.Rhistory
.Rapp.history

# Session Data files
.RData

# Example code in package build process
*-Ex.R

# Output files from R CMD build
/*.tar.gz

# Output files from R CMD check
/*.Rcheck/

# RStudio files
.Rproj.user/

# produced vignettes
vignettes/*.html
vignettes/*.pdf

# OAuth2 token, see https://github.com/hadley/httr/releases/tag/v0.3
.httr-oauth

# knitr and R markdown default cache directories
/*_cache/
/cache/

# Temporary files created by R markdown
*.utf8.md
*.knit.md

# Shiny token, see https://shiny.rstudio.com/articles/shinyapps.html
rsconnect/
add 'R.gitignore' for R 2011-10-08 15:23:47 +08:00			`# History files`
			`.Rhistory`
Add history file that is generated by R.app for Mac OS 2014-11-28 08:36:15 +08:00			`.Rapp.history`
add 'R.gitignore' for R 2011-10-08 15:23:47 +08:00
Ignore `.RData` files N.B. this ignores only the exact file `.RData` generated by default from `save.image()` and `quit()`. It is _not_ what is referred to in https://github.com/github/gitignore/commit/1f8466164330277fc8c9126ded3cc207ff3baf91 and http://cran.r-project.org/doc/manuals/r-release/R-exts.html#Data-in-packages, which refers only to files with an `*.RData` _extension_. 2015-10-02 20:50:47 +08:00			`# Session Data files`
			`.RData`

add 'R.gitignore' for R 2011-10-08 15:23:47 +08:00			`# Example code in package build process`
ensure single trailing newline 2013-10-06 20:40:01 +08:00			`*-Ex.R`
R.gitignore - Added .Rdata files 2014-02-27 20:45:11 +08:00
Ignore output from R CMD build and R CMD check Both rules are restricted to the top level only, so `*.tar.gz` files in data directories for instance will _not_ be ignored. 2015-10-02 20:45:11 +08:00			`# Output files from R CMD build`
			`/*.tar.gz`

			`# Output files from R CMD check`
			`/*.Rcheck/`

Add .Rproj for RStudio users RStudio - the only real R IDE, and an incredibly commonly used environment for R, particularly since it has git support - uses .Rproj files in projects, that follow the pattern projectname.Rproj. Adding .Rproj to capture these and exclude them. 2014-08-26 04:08:38 +08:00			`# RStudio files`
Change to directory 2014-09-02 16:14:55 +08:00			`.Rproj.user/`
exclude vignettes products 2014-10-25 18:28:19 +08:00
			`# produced vignettes`
			`vignettes/*.html`
			`vignettes/*.pdf`
ignore OAuth2 token Created for example when using https://github.com/jennybc/googlesheets 2015-05-20 23:12:32 +08:00
			`# OAuth2 token, see https://github.com/hadley/httr/releases/tag/v0.3`
			`.httr-oauth`
Add knitr and R markdown patterns to R.gitignore These patterns handle cache diretories and temporary files created by the widely used [knitr](http://yihui.name/knitr/) and [R markdown](http://rmarkdown.rstudio.com/) packages. 2016-04-29 22:17:44 +08:00
			`# knitr and R markdown default cache directories`
			`/*_cache/`
			`/cache/`

			`# Temporary files created by R markdown`
			`*.utf8.md`
			`*.knit.md`
Exclude secret deployment key in rsconnect/ Exclude secret deployment key in rsconnect/, see https://shiny.rstudio.com/articles/shinyapps.html for details. 2018-02-13 00:47:41 +08:00
			`# Shiny token, see https://shiny.rstudio.com/articles/shinyapps.html`
			`rsconnect/`